public class MMCifValidationParser
extends Object

Fields
Modifier and Type	Field	Description
`private boolean`	`asResidues`
`private Map<String,Integer>`	`atomMap`
`private AtomSetCollectionReader`	`reader`
`private Map<String,int[]>`	`resMap`

All Methods Instance Methods Concrete Methods
Modifier and Type	Method	Description
`String`	`finalizeRna3d(Map<String,Integer> modelMap)`
`String`	`finalizeValidations(Viewer vwr, Map<String,Integer> modelMap)`	Create property_xxxx for each validation category.
`private int[]`	`getModelAtomIndices()`	prepare a list of starting atom indices for each model, adding one additional one to indicate 1 + last atom index
`private SV`	`getRna3dMap(String addedData)`
`private void`	`mapAtomResIDs(Map<String,Integer> modelMap)`	Map all atom and residue unit ids to atom indexes
`MMCifValidationParser`	`set(AtomSetCollectionReader reader)`
`private String`	`setProperties(javajs.util.Lst<Object> propList)`	Set property_xxx for atoms from list of name, data, modelIndex series.

Constructor Detail
- MMCifValidationParser
```
public MMCifValidationParser()
```

public MMCifValidationParser set(AtomSetCollectionReader reader)

public String finalizeValidations(Viewer vwr,
                                  Map<String,Integer> modelMap)

Create property_xxxx for each validation category.

public String finalizeRna3d(Map<String,Integer> modelMap)

private SV getRna3dMap(String addedData)

Class MMCifValidationParser