All Methods Instance Methods Abstract Methods
Modifier and Type	Method	Description
`boolean`	`addLatticeVector(javajs.util.Lst<float[]> lattvecs, String substring)`
`void`	`addModulation(Map<String,double[]> map, String id, double[] pt, int iModel)`
`void`	`addSubsystem(String code, javajs.util.Matrix w)`
`void`	`finalizeModulation()`
`SymmetryInterface`	`getAtomSymmetry(Atom a, SymmetryInterface symmetry)`
`double[]`	`getMod(String key)`
`char`	`getModType(String key)`
`Map<String,double[]>`	`getModulationMap()`
`double[]`	`getQCoefs(String key)`
`SymmetryInterface`	`getSymmetryFromCode(String spaceGroupOperationCode)`
`int`	`initialize(AtomSetCollectionReader r, int modDim)`
`void`	`setMinMax0(javajs.util.P3 minXYZ0, javajs.util.P3 maxXYZ0)`
`void`	`setModulation(boolean isPost, SymmetryInterface symmetry)`

void addModulation(Map<String,double[]> map,
                   String id,
                   double[] pt,
                   int iModel)

void addSubsystem(String code,
                  javajs.util.Matrix w)

int initialize(AtomSetCollectionReader r,
               int modDim)
        throws Exception

void setModulation(boolean isPost,
                   SymmetryInterface symmetry)
            throws Exception

SymmetryInterface getAtomSymmetry(Atom a,
                                  SymmetryInterface symmetry)

void setMinMax0(javajs.util.P3 minXYZ0,
                javajs.util.P3 maxXYZ0)

SymmetryInterface getSymmetryFromCode(String spaceGroupOperationCode)

boolean addLatticeVector(javajs.util.Lst<float[]> lattvecs,
                         String substring)
                  throws Exception

Map<String,double[]> getModulationMap()

Interface MSInterface