Package org.jmol.atomdata

Interface AtomDataServer

All Known Implementing Classes:

NMR_Viewer, Viewer

public interface AtomDataServer

Method Summary

Modifier and Type	Method	Description
float	evalFunctionFloat(Object func, Object params, float[] values)
void	fillAtomData(AtomData atomData, int mode)
BufferedInputStream	getBufferedInputStream(String fullPathName)
AtomIndexIterator	getSelectedAtomIterator(javajs.util.BS bsSelected, boolean isGreaterOnly, boolean modelZeroBased, boolean isMultiModel)
void	log(String msg)
Map<String,Object>	readCifData(String fileName, Object rdrOrStringData, String type)
void	setIteratorForAtom(AtomIndexIterator iterator, int atomIndex, float distance)
void	setIteratorForPoint(AtomIndexIterator iter, int modelIndex, javajs.util.T3 pt, float maxDistance)

Method Detail

getSelectedAtomIterator

AtomIndexIterator getSelectedAtomIterator(javajs.util.BS bsSelected,
                                          boolean isGreaterOnly,
                                          boolean modelZeroBased,
                                          boolean isMultiModel)

setIteratorForAtom

void setIteratorForAtom(AtomIndexIterator iterator,
                        int atomIndex,
                        float distance)

setIteratorForPoint

void setIteratorForPoint(AtomIndexIterator iter,
                         int modelIndex,
                         javajs.util.T3 pt,
                         float maxDistance)

fillAtomData

void fillAtomData(AtomData atomData,
                  int mode)

getBufferedInputStream

BufferedInputStream getBufferedInputStream(String fullPathName)

log

void log(String msg)

evalFunctionFloat

float evalFunctionFloat(Object func,
                        Object params,
                        float[] values)

readCifData

Map<String,Object> readCifData(String fileName,
                                     Object rdrOrStringData,
                                     String type)