Example data.frame representing reporter information

Description

The reporter object is a 500 by 1 data frame. The rows represent the 500 probe IDs in the geneData data. The values in reporter are the predefined probe types for the probes. reporter is used in conjunction with the geneData object and its associates.

Usage

data(reporter)

Format

A 500 by 1 data frame

Details

There are 10 predefined probe types:

• AFFX-Quality Control (QC)
• _f_SequenceFamily
• _g_CommonGroups
• _s_SimilarityConstraint
• _r_RulesDropped
• _i_Incomplete
• _b_AmbiguousProbeSet
• _l_LongProbeSet
• _atAntiSenseTarget
• _stSenseTarget

Source

Affymetrix GeneChip Expression Analysis Data Analysis Fundamentals (http://www.affymetrix.com/Auth/support/downloads/manuals/data_analysis_fundamentals_manual.pdf)

Examples

data(reporter)
## maybe str(reporter) ; plot(reporter) ...